
Wednesday February 26, 2003
6:00 pm to 10:00 pm
The Basque Cultural Center
South San Francisco, CA
Dinner reservations required
by noon on Friday February 21, 2003
"Mass Defect" Tags for Biomolecular Mass Spectroscopy
Mike Hall
co-authors: S. Ashrafi, R. Petesch, and L.V. Schneider
Target Discovery, Palo Alto, CA
Abstract
We present a new class of "mass defect" tags with broad utility in
biomolecular mass spectrometry. Elements with atomic numbers between 17
(CI) and 77 (Ir) have a substantially different nuclear binding energy
(mass defect) from the elements common to biomolecules. This mass defect
yields a readily resolvable mass difference between tagged and untagged
species in highresolution mass spectrometers. Examples of the use of these
tags in inverted mass ladder sequencing (IMLS(TM)) and as isotope differentiated
binding energy shift tags (IDBEST(TM)) for differential peptide display
on protein chips are presented. IMLS(TM) has substantial speed and cost
advantages over traditional tandem MS sequencing methods. IDBEST(TM) may
yield the precision advantages of isotope-coded affinity tags (ICAT), without
the need for affmity cleanup of the peptides. Mass defect tags also have
potential for sequencing other biopolymers (e.g., DNA, oligosaccharides,
and lipids) and in combinatorial chemistry and high throughput screening
applications.
Background
Michael P. Hall, Ph.D., is a senior scientist at Target Discovery,
Inc. and co-inventor of the IMLS(TM) and IDBEST (TM) mass spectral technologies.
Before Target Discovery, Inc., he worked in the pharmaceutical discovery
division of SRI International in Menlo Park, CA where he worked in the
areas of diagnostics and drug formulation. He received his doctorate in
Biophysical Chemistry from Stanford University in 1996.
Meeting details
| Date: | Wednesday | February 26, 2003 |
| Time: | 6:00 pm | Social hour, registration (no-host cocktails) |
| 7:00 pm | Dinner | |
| 8:00 pm | Lecture | |
| Dinner: | Choice of: | Veal roast |
| Salmon | ||
| Vegetarian Pasta | ||
| includes | (various side dishes & dessert) | |
| Cost: | $25.00 | BAMS members. Reservations required by noon on Friday February 21, 2003 |
| $35.00 | Non-members. Reservations required by noon on Friday February 21, 2003 | |
| $15.00 | Students only. Reservations required by noon on Friday February 21, 2003 |
Note: 2003 dues need to be paid to obtain member price. Dues ($20) may be paid while registering for dinner.
Maps & directions
The Basque Cultural Center
599 Railroad Avenue
South San Francisco, CA 94080
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The San Francisco Bay Area Mass Spectrometry discussion group was formed in 1980 to provide a regular gathering for people interested in mass spectrometry and allied topics. BAMS currently has a membership of about 280 individual and 20 corporate members, and meets 8-10 times per year for a midweek dinner and lecture. Meetings attract between 30 and 90 people, and are held at a restaurant or hotel in the bay area convenient for our speaker. We usually convene at 6:00 pm for cocktails, dinner at 7:00 pm, and lecture at 8:15 pm.
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Last update: 2/4/2003